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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932890.1_cds_XP_016479328.1_70881
CDS Infomation

[gene=LOC107800636] [db_xref=GeneID:107800636] [protein=branched-chain-amino-acid aminotransferase 2, chloroplastic-like] [protein_id=XP_016479328.1] [location=complement(join(58950..59064,59682..60007,60139..60237,60413..60544,60657..60833,60907..61078,61227..61267,61742..61801))] [gbkey=CDS]
Sequence

ATGATTCGAGGGGCTGCAATTTTTCGTAAATTATATCAATCTTCAGCTTTATCTTCAAAG
GTTACAGCAAGATACTATACAGCTCAGGCTGCATTTTACAGTGATGACGAGTCTGCGGAT
ATTGACTGGGATAATCTTGGATTCCATTTGATGCAAACTGATTTTATGTACGTAACAAAA
AGCTCTGAAGACGGAACTTTTAGACAAGGACAGCTTAATCGTTATGGGAATATCCAATTA
AGCCCCTCTGCTGGTGTACTGAACTATGGACAGGGTTTGTTTGAAGGTATAAAAGCGTAT
AGAAGAGAGGACGGACGGATATTTCTATTTCGCCCTCATCAGAATGCAATTAGAATGCAG
TTTGGTGCAGAAAGAATGTGCATGGCTTCCCCTACCACTGATCAATTTGTCGATGCTGTT
AAGCAAACTGCTCTCGCTAACAAGCGTTGGATTCCTCCTCCTGGAAAAGGGTCTCTTTAT
ATTAGGCCTCTGTTAATAGGGAGTGGACCCATTTTGGGTTTGGCTCCCGCACCTGAGTAC
ACTTTCCTTGTCTATGCCTGCCCTGTTGGTAATTATTTTAAGCAAGGAACAGCGCCATTG
AACTTGTATGTGGAGGAAGACGTTCATCGCGCCTCACGTGGTGGAGCTGGTGGAGTCAAA
AGCATTACTAACTATGCTCCCGTTTTAAAAGCGATGAAGAATGCAAAGGAGAAAGGATAT
TCAGATGTACTATATCTTGACGCAGTAAATAAGAAATATATTGAAGAGGTCTCTTCTTGT
AATATTTTCCTTGTTAAGGGAAATGTAGTTTCAACTCCAATAGCCAAAGGAACTATTCTT
GAAGGAGTGACACGAAAAAGTATTATGGAGATTGCACTTGATTTAGGTTACAAGGTTGAA
GAACGTTCAATTGAAGCTGATGAATTAATTACTGCTGATGAAGTATTTTGTACGGGAACT
GCAGTTGGTGTTGCTCCTGTTGGAAGTATTACTTACAAAGGCCAAAGGATTGAGTATAAA
ATAAGCTCAGATCTAACGTGCAAGCAATTTTATTCGAGATTAGTAGGGATTCAAAGAGGT
GTTATCGCCGATGAAAGGGACTGGATCGTTGAGATTGAATGA

Peptide Sequence

PEP ID

XP_016479328.1
PEP Infomation

PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MIRGAAIFRKLYQSSALSSKVTARYYTAQAAFYSDDESADIDWDNLGFHLMQTDFMYVTK
SSEDGTFRQGQLNRYGNIQLSPSAGVLNYGQGLFEGIKAYRREDGRIFLFRPHQNAIRMQ
FGAERMCMASPTTDQFVDAVKQTALANKRWIPPPGKGSLYIRPLLIGSGPILGLAPAPEY
TFLVYACPVGNYFKQGTAPLNLYVEEDVHRASRGGAGGVKSITNYAPVLKAMKNAKEKGY
SDVLYLDAVNKKYIEEVSSCNIFLVKGNVVSTPIAKGTILEGVTRKSIMEIALDLGYKVE
ERSIEADELITADEVFCTGTAVGVAPVGSITYKGQRIEYKISSDLTCKQFYSRLVGIQRG
VIADERDWIVEIE

Transcript Sequence

Gene sequence data has not been registered.